bioinformatics chat

Steady states of metabolic networks and Dingo with Apostolos Chalkis (#62)

July 28, 2021

In this episode, Apostolos Chalkis presents sampling steady states of metabolic networks as an alternative to the widely used flux balance analysis (FBA). We also discuss dingo, a Python package written by Apostolos that employs geometric random walks to sample steady states. You can see dingo in action here.

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Music: Eric Skiff — Come and Find Me (modified, licensed under CC BY 4.0).