bioinformatics chat

Steady states of metabolic networks and Dingo with Apostolos Chalkis (#62)

July 28, 2021

In this episode, Apostolos Chalkis presents sampling steady states of metabolic networks as an alternative to the widely used flux balance analysis (FBA). We also discuss dingo, a Python package written by Apostolos that employs geometric random walks to sample steady states. You can see dingo in action here.


Music: Eric Skiff — Come and Find Me (modified, licensed under CC BY 4.0).

Subscribe to the bioinformatics chat on Apple Podcasts, Pocket Casts, Spotify, or any other podcasting app via the RSS feed link. You can also follow the podcast on Mastodon and Twitter and support it on Patreon.