Optimal transport for single-cell expression data with Geoffrey Schiebinger — the bioinformatics chat, a podcast about bioinformatics

Optimal transport for single-cell expression data with Geoffrey Schiebinger (#15)

November 26, 2017

Geoffrey Schiebinger explains how reconstructing developmental trajectories from single-cell RNA-seq data can be reduced to the mathematical problem called optimal transport.

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Reconstruction of developmental landscapes by optimal-transport analysis of single-cell gene expression sheds light on cellular reprogramming.
Talk by Geoffrey and Lénaïc Chizat

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Music: Eric Skiff — Come and Find Me (modified, licensed under CC BY 4.0).