Plasmid classification and binning with Sergio Arredondo-Alonso and Anita Schürch (#40)
December 30, 2019
Does a given bacterial gene live on a plasmid or the chromosome? What other genes live on the same plasmid?
- mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species (Sergio Arredondo-Alonso, Malbert R. C. Rogers, Johanna C. Braat, Tess D. Verschuuren, Janetta Top, Jukka Corander, Rob J. L. Willems, Anita C. Schürch)
- gplas: a comprehensive tool for plasmid analysis using short-read graphs (Sergio Arredondo-Alonso, Martin Bootsma, Yaïr Hein, Malbert R.C. Rogers, Jukka Corander, Rob JL Willems, Anita C. Schürch)
This episode was recorded with Cast.